Package: matos 0.5.0

matos: Interface with the Mid-Atlantic Acoustic Telemetry Observing System (MATOS)

This package provides HTML-scaping functions to interact with the MATOS website (https://matos.asascience.com/), allowing aggregation of data and the downloading and posting of files.

Authors:Michael O'Brien [aut, cre]

matos_0.5.0.tar.gz
matos_0.5.0.zip(r-4.7-any)matos_0.5.0.zip(r-4.6-any)matos_0.5.0.zip(r-4.5-any)
matos_0.5.0.tgz(r-4.6-any)matos_0.5.0.tgz(r-4.5-any)
matos_0.5.0.tar.gz(r-4.6-any)
matos_0.5.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
matos/json (API)

# Install 'matos' in R:

install.packages('matos', repos = c('https://mhpob.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mhpob/matos/issues

Pkgdown/docs site:https://matos.obrien.page

On CRAN:

animal-tracking api api-wrapper biotelemetry fish fisheries fisheries-research quarto

3.78 score 4 stars 9 scripts 18 exports 86 dependencies

Last updated from:df33d04d23. Checks:2 FAIL, 2 OK, 5 ERROR. Indexed: yes.

Target	Result	Time
linux-devel	FAIL	3727
source / vignettes	OK	248
linux-release	FAIL	3720
macos-release	ERROR	201
macos-oldrel	ERROR	127
windows-devel	ERROR	105
windows-release	ERROR	120
windows-oldrel	ERROR	94
wasm-release	OK	131

Exports:get_extract_file get_extract_updates get_otn_template get_project_file get_tag_search list_extract_files list_my_projects list_project_files list_projects matos_login matos_logoff matos_receiver_summary matos_tag_summary set_matos_credentials skip_example_on_ci skip_example_on_cran skip_example_on_runiverse upload_file

Dependencies:arrow askpass assertthat base64enc bit bit64 bslib cachem cellranger class classInt cli cpp11 crayon curl data.table DBI digest e1071 evaluate farver fastmap fontawesome fs getPass ggplot2 glue gtable highr hms htmltools htmlwidgets httr isoband jquerylib jsonlite KernSmooth knitr labeling later lifecycle magrittr memoise mime openssl otndo pillar pkgconfig prettyunits processx progress proxy ps purrr quarto R6 rappdirs RColorBrewer Rcpp reactable reactR readxl rematch rlang rmarkdown rstudioapi rvest s2 S7 sass scales selectr sf sys tibble tidyselect tinytex units utf8 vctrs viridisLite withr wk xfun xml2 yaml

Introduction

Rendered fromintroduction.Rmdusingknitr::rmarkdown

Last update: 2024-12-20
Started: 2023-02-08

matos for the power user

Parallel | Listing | Downloading | Summarizing

Rendered frommultiple-projects.Rmdusingknitr::rmarkdown

Last update: 2023-11-06
Started: 2023-02-22

Summarizing with otndo

ACT members

Rendered frommatos-otndo.Rmdusingknitr::rmarkdown

Last update: 2023-10-30
Started: 2023-03-10

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Miscellaneous functions for package checking, building, and CI	CI_utilities skip_example_on_ci skip_example_on_cran skip_example_on_runiverse
Download OTN data extraction files from the MATOS website	get_extract_file
Download all data extraction files that were updated after a certain date	get_extract_updates
Download Ocean-Tracking-Network-style metadata templates	get_otn_template
Download project files from the MATOS website	get_project_file
Search for tags on the MATOS website	get_tag_search
List OTN data extraction files	list_extract_files
List personal MATOS projects	list_my_projects
List MATOS project files	list_project_files
List MATOS projects	list_projects
Log in to your MATOS account	matos_login
Log out of your MATOS account	matos_logoff
Create summary reports of receiver project data from the OTN data push	matos_receiver_summary
Create summary reports of receiver project data from the OTN data push	matos_tag_summary
Install your MATOS username and password in your '.Renviron' File for repeated use	set_matos_credentials
Upload files to MATOS	upload_file
Internal functions used by 'matos'	download_process get_file_list get_file_list_mem get_project_name get_project_number html_table_to_df login_check project_check scrape_file_urls utilities