{ "_id": "6a1bddcd1d7bb097a0a1789c", "Package": "matos", "Type": "Package", "Title": "Interface with the Mid-Atlantic Acoustic Telemetry Observing\nSystem (MATOS)", "Version": "0.5.0", "Authors@R": "person(\"Michael\", \"O'Brien\", email = \"mike@obrien.page\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-1420-6395\"))", "Description": "This package provides HTML-scaping functions to interact\nwith the MATOS website (https://matos.asascience.com/),\nallowing aggregation of data and the downloading and posting of\nfiles.", "Remotes": [ "mhpob/otndo", "mhpob/rvdat" ], "License": "GPL (>= 3)", "Encoding": "UTF-8", "RoxygenNote": "7.3.2", "URL": "https://github.com/mhpob/matos, https://matos.obrien.page", "BugReports": "https://github.com/mhpob/matos/issues", "Config/testthat/edition": "3", "VignetteBuilder": "knitr", "Roxygen": "list(markdown = TRUE)", "Config/pak/sysreqs": "libabsl-dev cmake libfontconfig1-dev\nlibfreetype6-dev libfribidi-dev libgdal-dev gdal-bin\nlibgeos-dev make libharfbuzz-dev libicu-dev libpng-dev\nlibuv1-dev libxml2-dev libssl-dev libproj-dev libsqlite3-dev\nlibudunits2-dev zlib1g-dev", "Repository": "https://mhpob.r-universe.dev", "Date/Publication": "2026-03-30 20:47:03 UTC", "RemoteUrl": "https://github.com/mhpob/matos", "RemoteRef": "HEAD", "RemoteSha": "df33d04d233a82857a722fe26e7e0c244d5beaf4", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-30 09:33:37 UTC", "User": "root" }, "Author": "Michael O'Brien [aut, cre] (ORCID:\n)", "Maintainer": "Michael O'Brien ", "MD5sum": "08c9c73bded8a2f08fc01411e33902be", "_user": "mhpob", "_type": "src", "_file": "matos_0.5.0.tar.gz", "_fileid": "9303b52a44ace0c35417a530e23a664744351abdc51ef74eacab0d943eb4a76f", "_filesize": 193203, "_sha256": "9303b52a44ace0c35417a530e23a664744351abdc51ef74eacab0d943eb4a76f", "_created": "2026-05-30T09:33:37.000Z", "_published": "2026-05-31T07:05:49.159Z", "_distro": "noble", "_jobs": [ { "job": 78703919652, "time": 3975, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "FAIL", "artifact": "" }, { "job": 78703919661, "time": 3738, "config": "linux-release-x86_64", "r": "4.6.0", "check": "FAIL", "artifact": "" }, { "job": 78703919625, "time": 127, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "7314273445" }, { "job": 78703919623, "time": 158, "config": "macos-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "7314274257" }, { "job": 78703919633, "time": 241, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7307208740" }, { "job": 78703919750, "time": 152, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7307274947" }, { "job": 78703919640, "time": 110, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "7314254147" }, { "job": 78703919645, "time": 135, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "7314256217" }, { "job": 78703919644, "time": 140, "config": "windows-release", "r": "4.6.0", "check": "ERROR", "artifact": "7314257152" } ], "_buildurl": "https://github.com/r-universe/mhpob/actions/runs/26621305507", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/mhpob/matos", "_commit": { "id": "df33d04d233a82857a722fe26e7e0c244d5beaf4", "author": "mhpob ", "committer": "mhpob ", "message": "Style code (GHA)\n", "time": 1774903623 }, "_maintainer": { "name": "Michael OBrien", "email": "mike@obrien.page", "login": "mhpob", "mastodon": "@mobrien@fosstodon.org", "bluesky": "@obrien.page", "orcid": "0000-0003-1420-6395", "description": "Faculty Research Assistant at the Chesapeake Biological Laboratory", "uuid": 8228205 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "cli", "role": "Imports" }, { "package": "curl", "role": "Imports" }, { "package": "getPass", "role": "Imports" }, { "package": "httr", "role": "Imports" }, { "package": "memoise", "role": "Imports" }, { "package": "otndo", "role": "Imports" }, { "package": "rvest", "role": "Imports" }, { "package": "future.apply", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "rvdat", "role": "Suggests" } ], "_owner": "mhpob", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-31", "n": 4 }, { "week": "2026-14", "n": 2 } ], "_tags": [], "_topics": [ "animal-tracking", "api", "api-wrapper", "biotelemetry", "fish", "fisheries", "fisheries-research", "quarto" ], "_stars": 4, "_contributors": [ { "user": "mhpob", "count": 534, "uuid": 8228205 } ], "_userbio": { "uuid": 8228205, "type": "user", "name": "Mike O'Brien", "description": "Faculty Research Assistant at the Chesapeake Biological Laboratory" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/matos" }, "_devurl": "https://github.com/mhpob/matos", "_pkgdown": "https://matos.obrien.page", "_searchresults": 9, "_quarto": true, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/matos.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_cranurl": false, "_exports": [ "get_extract_file", "get_extract_updates", "get_otn_template", "get_project_file", "get_tag_search", "list_extract_files", "list_my_projects", "list_project_files", "list_projects", "matos_login", "matos_logoff", "matos_receiver_summary", "matos_tag_summary", "set_matos_credentials", "skip_example_on_ci", "skip_example_on_cran", "skip_example_on_runiverse", "upload_file" ], "_help": [ { "page": "CI_utilities", "title": "Miscellaneous functions for package checking, building, and CI", "topics": [ "CI_utilities", "skip_example_on_ci", "skip_example_on_cran", "skip_example_on_runiverse" ] }, { "page": "get_extract_file", "title": "Download OTN data extraction files from the MATOS website", "topics": [ "get_extract_file" ] }, { "page": "get_extract_updates", "title": "Download all data extraction files that were updated after a certain date", "topics": [ "get_extract_updates" ] }, { "page": "get_otn_template", "title": "Download Ocean-Tracking-Network-style metadata templates", "topics": [ "get_otn_template" ] }, { "page": "get_project_file", "title": "Download project files from the MATOS website", "topics": [ "get_project_file" ] }, { "page": "get_tag_search", "title": "Search for tags on the MATOS website", "topics": [ "get_tag_search" ] }, { "page": "list_extract_files", "title": "List OTN data extraction files", "topics": [ "list_extract_files" ] }, { "page": "list_my_projects", "title": "List personal MATOS projects", "topics": [ "list_my_projects" ] }, { "page": "list_project_files", "title": "List MATOS project files", "topics": [ "list_project_files" ] }, { "page": "list_projects", "title": "List MATOS projects", "topics": [ "list_projects" ] }, { "page": "matos_login", "title": "Log in to your MATOS account", "topics": [ "matos_login" ] }, { "page": "matos_logoff", "title": "Log out of your MATOS account", "topics": [ "matos_logoff" ] }, { "page": "matos_receiver_summary", "title": "Create summary reports of receiver project data from the OTN data push", "topics": [ "matos_receiver_summary" ] }, { "page": "matos_tag_summary", "title": "Create summary reports of receiver project data from the OTN data push", "topics": [ "matos_tag_summary" ] }, { "page": "set_matos_credentials", "title": "Install your MATOS username and password in your '.Renviron' File for repeated use", "topics": [ "set_matos_credentials" ] }, { "page": "upload_file", "title": "Upload files to MATOS", "topics": [ "upload_file" ] }, { "page": "utilities", "title": "Internal functions used by 'matos'", "topics": [ "download_process", "get_file_list", "get_file_list_mem", "get_project_name", "get_project_number", "html_table_to_df", "login_check", "project_check", "scrape_file_urls", "utilities" ] } ], "_readme": "https://github.com/mhpob/matos/raw/HEAD/README.md", "_rundeps": [ "askpass", "base64enc", "brew", "bslib", "cachem", "cellranger", "class", "classInt", "cli", "cpp11", "crayon", "crosstalk", "curl", "data.table", "DBI", "digest", "e1071", "evaluate", "farver", "fastmap", "fontawesome", "fs", "geojsonsf", "geometries", "getPass", "ggplot2", "glue", "gtable", "highr", "hms", "htmltools", "htmlwidgets", "httpuv", "httr", "isoband", "jquerylib", "jsonify", "jsonlite", "KernSmooth", "knitr", "labeling", "later", "lattice", "lazyeval", "leafem", "leaflet", "leaflet.providers", "leafpop", "lifecycle", "magrittr", "mapview", "MASS", "memoise", "mime", "openssl", "otel", "otndo", "pillar", "pkgconfig", "plyr", "png", "prettyunits", "processx", "progress", "promises", "proxy", "ps", "quarto", "R6", "rapidjsonr", "rappdirs", "raster", "RColorBrewer", "Rcpp", "reactable", "reactR", "readxl", "rematch", "rlang", "rmarkdown", "rstudioapi", "rvest", "s2", "S7", "sass", "satellite", "scales", "selectr", "servr", "sf", "sfheaders", "sp", "stringi", "stringr", "svglite", "sys", "systemfonts", "terra", "textshaping", "tibble", "tinytex", "units", "utf8", "uuid", "vctrs", "viridisLite", "withr", "wk", "xfun", "xml2", "yaml" ], "_vignettes": [ { "source": "multiple-projects.Rmd", "filename": "multiple-projects.html", "title": "matos for the power user", "engine": "knitr::rmarkdown", "headings": [ "Parallel", "Listing", "Downloading", "Summarizing" ], "created": "2023-02-22 23:26:14", "modified": "2023-11-06 01:11:47", "commits": 4 }, { "source": "introduction.Rmd", "filename": "introduction.html", "title": "Introduction", "engine": "knitr::rmarkdown", "headings": [ "List available files", "User credentials", "Back to the regularly-scheduled programming", "Download project or data extraction files", "Search and download tag detections", 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