{ "_id": "6a486e37e06c18f0a653b2ae", "Package": "simfish", "Type": "Package", "Title": "simulate fish tracks & acoustic detections", "Version": "0.2-08.9010", "Date": "2023-05-13", "Author": "Ian Jonsen", "Maintainer": "Ian Jonsen ", "Description": "facilitates simulation of fish tracks in featureless and\nsemi-realistic environments (coastal oceans, fjords, and\nlakes). A user-defined raster defining the water body - land\nboundaries is used to constrain simulated tracks. Fish\nmovements are simulated (currently) as either a correlated\nrandom walk or a biased & correlated random walk, with the bias\ntoward a defined Centre-of-Attraction. A potential function is\nused to ensure the tracks avoid land. The package can also be\nused to simulate detections of acoustically-tagged fish by\nacoustic receivers at user-defined locations.", "URL": "https://github.com/ianjonsen/simfish/,", "Remotes": [ "jmlondon/pathroutr" ], "License": "AGPL-3", "Encoding": "UTF-8", "RoxygenNote": "7.2.3", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nlibglpk-dev libicu-dev libxml2-dev libssl-dev libproj-dev\nlibsqlite3-dev libudunits2-dev", "Repository": "https://mhpob.r-universe.dev", "Date/Publication": "2024-01-05 17:32:26 UTC", "RemoteUrl": "https://github.com/mhpob/simfish", "RemoteRef": "HEAD", "RemoteSha": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "NeedsCompilation": "no", "Packaged": { "Date": "2026-07-04 02:15:45 UTC", "User": "root" }, "_user": "mhpob", "_type": "src", "_file": "simfish_0.2-08.9010.tar.gz", "_fileid": "https://r2.ropensci.org/b63665425b60d01989b947aa1dd7cc2a38f93890480c920495d01481dd2f3dd2", "_filesize": 483148, "_sha256": "b63665425b60d01989b947aa1dd7cc2a38f93890480c920495d01481dd2f3dd2", "_expires": "2026-10-12T02:21:41.000Z", "_created": "2026-07-04T02:15:45.000Z", "_published": "2026-07-04T02:21:43.238Z", "_jobs": [ { "job": 85094574127, "time": 301, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "ERROR", "artifact": "8077425840" }, { "job": 85094574117, "time": 286, "config": "linux-release-x86_64", "r": "4.6.1", "check": "ERROR", "artifact": "8077424230" }, { "job": 85094574120, "time": 178, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "8077413492" }, { "job": 85094574131, "time": 205, "config": "macos-release-arm64", "r": "4.6.1", "check": "ERROR", "artifact": "8077421625" }, { "job": 85094323669, "time": 245, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8077392305" }, { "job": 85094574133, "time": 176, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8077412078" }, { "job": 85094574118, "time": 246, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "8077419798" }, { "job": 85094574123, "time": 234, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "8077418529" }, { "job": 85094574122, "time": 240, "config": "windows-release", "r": "4.6.1", "check": "ERROR", "artifact": "8077419097" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/mhpob/actions/runs/28691783354", "_status": "success", "_upstream": "https://github.com/mhpob/simfish", "_commit": { "id": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "author": "Mike O'Brien ", "committer": "Mike O'Brien ", "message": "Should close https://github.com/ianjonsen/simfish/issues/2\n", "time": 1704475946 }, "_maintainer": { "name": "Ian Jonsen", "email": "ian.jonsen@mq.edu.au" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.2.2", "role": "Depends" }, { "package": "dplyr", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "raster", "version": ">= 3.6-20", "role": "Imports" }, { "package": "sp", "role": "Imports" }, { "package": "tibble", "role": "Imports" }, { "package": "CircStats", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "sf", "version": ">= 1.0-12", "role": "Imports" }, { "package": "lubridate", "role": "Imports" }, { "package": "stringr", "role": "Imports" }, { "package": "stars", "role": "Imports" }, { "package": "rnaturalearth", "version": ">= 0.2.0", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "pathroutr", "role": "Imports" }, { "package": "terra", "version": ">= 1.7-18", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "rnaturalearthhires", "role": "Suggests" } ], "_owner": "mhpob", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "mhpob", "count": 4, "uuid": 8228205 } ], "_userbio": { "uuid": 8228205, "type": "user", "name": "Mike O'Brien", "followers": 45, "description": "Faculty Research Assistant at the Chesapeake Biological Laboratory" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/simfish" }, "_devurl": "https://github.com/ianjonsen/simfish", "_searchresults": 11, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/readme.html", "extra/readme.md", "extra/simfish.html", "manual.pdf" ], "_cranurl": false, "_exports": [ "calc_pdrf", "find_route", "generate_env", "map", "pdet", "sim_detect", "sim_fish", "sim_par" ], "_help": [ { "page": "simfish-package", "title": "'simfish'", "topics": [ "simfish-package", "simfish" ] }, { "page": "calc_pdrf", "title": "calculate pdrf parameters", "topics": [ "calc_pdrf" ] }, { "page": "find_route", "title": "find_route", "topics": [ "find_route" ] }, { "page": "generate_env", "title": "create environmental raster", "topics": [ "generate_env" ] }, { "page": "map", "title": "map", "topics": [ "map" ] }, { "page": "pdet", "title": "Utility fn to calculate distances b/w transmitter and reciever", "topics": [ "pdet" ] }, { "page": "plot.simfish", "title": "plot", "topics": [ "plot.simfish" ] }, { "page": "sim_detect", "title": "simulate acoustic transmissions & detection, using 'simulate' & 'sim_setup' output", "topics": [ "sim_detect" ] }, { "page": "sim_fish", "title": "simulate a fish track", "topics": [ "sim_fish" ] }, { "page": "sim_par", "title": "Define the simulation parameters used by 'sim_fish'", "topics": [ "sim_par" ] } ], "_readme": "https://github.com/mhpob/simfish/raw/HEAD/README.md", "_rundeps": [ "abind", "askpass", "boot", "CircStats", "class", "classInt", "cli", "cpp11", "curl", "DBI", "dplyr", "e1071", "farver", "generics", "ggplot2", "glue", "gtable", "httr", "isoband", "jsonlite", "KernSmooth", "labeling", "lattice", "lifecycle", "lubridate", "magrittr", "MASS", "mime", "openssl", "pathroutr", "pillar", "pkgconfig", "proxy", "R6", "raster", "RColorBrewer", "Rcpp", "rlang", "rnaturalearth", "s2", "S7", "scales", "sf", "sp", "stars", "stringi", "stringr", "sys", "terra", "tibble", "tidyselect", "timechange", "units", "utf8", "vctrs", "viridisLite", "withr", "wk" ], "_vignettes": [ { "source": "overview.Rmd", "filename": "overview.html", "title": "Overview", "engine": "knitr::rmarkdown", "headings": [ "Parameterizing the simulation" ], "created": "2023-04-05 16:12:51", "modified": "2023-04-27 14:25:47", "commits": 2 } ], "_score": 2.740362689494244, "_indexed": true, "_nocasepkg": "simfish", "_universes": [ "mhpob", "ianjonsen" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.2-08.9010", "date": "2026-07-04T02:18:50.000Z", "distro": "resolute", "commit": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "fileid": "https://r2.ropensci.org/6888b01580cff38498f860f704150cfdecd7ebc6edb459cd77a2da4077b3a3a1", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/mhpob/actions/runs/28691783354" }, { "r": "4.6.1", "os": "linux", "version": "0.2-08.9010", "date": "2026-07-04T02:18:54.000Z", "distro": "resolute", "commit": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "fileid": "https://r2.ropensci.org/65786a9cdebc4bbf753eff261d8a6f3c8714669b5eb6aef0a6b3f6e865322a7a", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/mhpob/actions/runs/28691783354" }, { "r": "4.5.3", "os": "mac", "version": "0.2-08.9010", "date": "2026-07-04T02:17:54.000Z", "commit": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "fileid": "https://r2.ropensci.org/96a2102c0f588b699e220544d4ed9ae286795d68ae8baec6166bf2c7b9a1e585", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/mhpob/actions/runs/28691783354" }, { "r": "4.6.1", "os": "mac", "version": "0.2-08.9010", "date": "2026-07-04T02:18:58.000Z", "commit": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "fileid": "https://r2.ropensci.org/70669c474dceda64a24f3f531e2a068e4c50d48d4dc16dec72c012aa8f8a8050", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/mhpob/actions/runs/28691783354" }, { "r": "4.6.0", "os": "wasm", "version": "0.2-08.9010", "date": "2026-07-04T02:19:09.000Z", "commit": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "fileid": "https://r2.ropensci.org/22725c806d7103fee64571c981304829a0236ee584a9ee145460757b091011d9", "status": "success", "buildurl": "https://github.com/r-universe/mhpob/actions/runs/28691783354" }, { "r": "4.7.0", "os": "win", "version": "0.2-08.9010", "date": "2026-07-04T02:17:45.000Z", "commit": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "fileid": "https://r2.ropensci.org/90347cf605aaed4c2e0f93cc6d8a90f1fc62fc2eed7dec9b679028ab174fe7f2", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/mhpob/actions/runs/28691783354" }, { "r": "4.5.3", "os": "win", "version": "0.2-08.9010", "date": "2026-07-04T02:17:57.000Z", "commit": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "fileid": "https://r2.ropensci.org/1f323b67e7fd234a4681c3736f8f981d0e8ae7ef2ae8823cd316789ec3638661", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/mhpob/actions/runs/28691783354" }, { "r": "4.6.1", "os": "win", "version": "0.2-08.9010", "date": "2026-07-04T02:17:42.000Z", "commit": "94abda3265fd8aa025ee0a0d8e5ace3d92b4214f", "fileid": "https://r2.ropensci.org/e0eef62313e5d1d605a0002507243354edb24e8d4176a085b2159b092e65178e", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/mhpob/actions/runs/28691783354" } ] }